BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B12SP1|AL427447
(911 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1769 1679 0.0
>3x_Contig1769
Length = 25795
Score = 1679 bits (836), Expect = 0.0
Identities = 879/904 (97%), Gaps = 1/904 (0%)
Strand = Plus / Plus
Query: 8 cggtggtttaatggatatggatgatttggctgctcataagagtbatttcgtttacccaat 67
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 5039 cggtggtttaatggatatggatgatttggctgctcataagagtgatttcgttgacccaat 5098
Query: 68 atatttggatttcctggagcataaaatttgggaaatacctccaaactctcaagggctcgt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5099 atatttggatttcctggagcataaaatttgggaaatacctccaaactctcaagggctcgt 5158
Query: 128 agttttacttgcattaggaataataagagagcttgacaaccagaaattgattaatctgca 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5159 agttttacttgcattaggaataataagagagcttgacaaccagaaattgattaatctgca 5218
Query: 188 ctcaatgcaaagaaattctktkgagtatttacacatgcycattgaatgcctcaagttagc 247
||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||
Sbjct: 5219 ctcaatgcaaagaaattctgtggagtatttacacatgctcattgaatgcctcaagttagc 5278
Query: 248 cttttatgattcagacgaatatgtgtctgaccctaattktcaggaagccgacatcctaca 307
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5279 cttttatgattcagacgaatatgtgtctgaccctaattgtcaggaagccgacatcctaca 5338
Query: 308 tcgattactctcaaaggactatttaaagagtcgtgcaaagctattcagccccagtggtat 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5339 tcgattactctcaaaggactatttaaagagtcgtgcaaagctattcagccccagtggtat 5398
Query: 368 cattgactcttctgttatcaaacatggagtyccgamcgaagatttcaatcagtcggacac 427
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 5399 cattgactcttctgttatcaaacatggagttccgaacgaagatttcaatcagtcggacac 5458
Query: 428 agtatattttaccgttagttacccatatgggaatgtgacatcgttcataaacyctttgta 487
||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 5459 agtatattttaccgtaagtgacccatatgggaatgtgacatcgttcataaactctttgta 5518
Query: 488 tgatggttttggttctygtattttkccacgaactttckgaggattttctctacagaatcg 547
|||||||||||||||| ||||| | |||||||||||| |||||||| |||||||||||||
Sbjct: 5519 tgatggttttggttcttgtattgtgccacgaactttcggaggatttgctctacagaatcg 5578
Query: 548 tggggccaactttaaccttacaccaggcactaagaactcattagagcctagtaaaasacc 607
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5579 tggggccaactttaaccttacaccaggcactaagaactcattagagcctagtaaaagacc 5638
Query: 608 ctatcatactattattccttccatcattaccagtaacgatgaatctaccgtttatggaat 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5639 ctatcatactattattccttccatcattaccagtaacgatgaatctaccgtttatggaat 5698
Query: 668 gggaaatatgggtggtttcatgcaacctagcgggccatktacaacattttttawwtttta 727
||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |
Sbjct: 5699 gggaaatatgggtggtttcatgcaacctagc-ggccatgtacaacattttttaaatttaa 5757
Query: 728 ttctctttgggttgaatccacaggagtbactggatagcccaagatgttgtctgtctccac 787
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5758 ttctctttgggttgaatccacaggagtcactggatagcccaagatgttgtctgtctccac 5817
Query: 788 atccaaagtattctcatctagaccgaggcagaggatcatccggacctgtsaacactcctg 847
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5818 atccaaagtattctcatctagaccgaggcagaggatcatccggacctgtcaacactcctg 5877
Query: 848 tgtctctcattcagttagaggaagatataccggaagatgtatttgatggtttagwtaaac 907
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5878 tgtctctcattcagttagaggaagatataccggaagatgtatttgatggtttagttaaac 5937
Query: 908 tcgg 911
||||
Sbjct: 5938 tcgg 5941
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4945
Number of Sequences: 1807
Number of extensions: 4945
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)